PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00008g03526.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 302aa    MW: 33964.1 Da    PI: 8.4776
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00008g03526.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-09168215455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Peaxi162Scf00008g03526.1 168 SHSLAERARREKISKKMKYLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 215
                               8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.93E-8162219No hitNo description
SuperFamilySSF474595.63E-17162233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.2E-18164232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.11164214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.1E-7168215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-9170220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MSVLERQRAV LERLYDQSKH QLSSLPQQHL FHFNNLMTGN MMGCLEVPID DQRLNQNFTN  60
FNTFVTQNNC QEMARPSFST VSNSSVTTVS KGQDQSTIVA SRENAFSEEE DCKTKRPEGK  120
AGEVKSEITE KSQRGASGNS SKENSKTSEV QKPDYIHVRA RRGQATDSHS LAERARREKI  180
SKKMKYLQDL VPGCNKVTGK AGMLDEIINY VQSLQKQVEF LSMKLAALNP QLHLNTDSFF  240
TKDFSNCMVN FPTVAMPTLT EYNIIQQQQG SSGVAQMLHQ RRENNLMSFQ ESSLGSTAAA  300
NF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016561840.11e-148PREDICTED: transcription factor HBI1
TrEMBLA0A0V0HU251e-120A0A0V0HU25_SOLCH; Putative transcription factor bHLH64-like
STRINGPGSC0003DMT4000400211e-118(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.21e-55bHLH family protein